Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3099
Gene Symbol: HK2
HK2
0.010 Biomarker disease BEFREE Fibroblasts from patients with idiopathic pulmonary fibrosis (IPF) exhibited an increased abundance of HK2. 31848318 2019
Entrez Id: 2350
Gene Symbol: FOLR2
FOLR2
0.020 AlteredExpression disease BEFREE <b>Results:</b> Folate receptor-β expression was 3- to 4-fold increased in patients with fibrotic ILD, including idiopathic pulmonary fibrosis and connective tissue disease-related ILD, and significantly correlated with the degree of lung remodeling. 31824505 2019
Entrez Id: 3248
Gene Symbol: HPGD
HPGD
0.010 AlteredExpression disease BEFREE We demonstrate that 15-PGDH shows areas of increased expression in IPF patients. 31812575 2020
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.100 Biomarker disease BEFREE Anti-CCN2 strategies are in clinical development for IPF, A recent study by Richeldi and colleagues described the recent Phase II clinical trial for FG-3019 in IPF, and the results were highly encouraging. 31811619 2019
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.100 Biomarker disease BEFREE Bleomycin and TGF-β1 were respectively used to induce the IPF mice model and human lung fibroblasts to myofibroblast differentiation. 31786325 2020
Entrez Id: 10859
Gene Symbol: LILRB1
LILRB1
0.010 Biomarker disease BEFREE The circ0044226 was upregulated while miR-7 was downregulated in IPF mice model and FMT-derived myofibroblasts. miR-7 was a target of circ0044226 and sp1 was a target of miR-7. circ0044226 was distributed mostly in the cytoplasm and functioned as a miR-7 sponge to positively regulate the expression of sp1. 31786325 2020
Entrez Id: 1269
Gene Symbol: CNR2
CNR2
0.010 AlteredExpression disease BEFREE The results demonstrated that CB2R protein and mRNA levels increased with increasing fibrosis in mice with BLM-induced IPF. 31777533 2019
Entrez Id: 4899
Gene Symbol: NRF1
NRF1
0.010 AlteredExpression disease BEFREE Mitochondria in AMs from IPF patients had prominent morphological defects and impaired transcription paralleled to a significant reduction of mitochondria homeostasis regulators PINK1, PARK2 and NRF1. mtROS, was significantly higher in IPF and associated with reduced expression of mitochondria-encoded oxidative phosphorylation (OXPHOS) genes. 31775876 2019
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.100 Biomarker disease BEFREE We found the highly aligned IPF collagen structure promoted enhanced cell elongation and f-actin alignment, along with increased cell migration speed and straightness relative to the normal tissues. 31774302 2020
Entrez Id: 3491
Gene Symbol: CCN1
CCN1
0.030 Biomarker disease BEFREE Given the plausible role of CCN1 in cellular senescence and pathobiology of IPF, the predictive value of CCN1 in disease progression among patients with IPF warrants further investigation. 31765873 2020
Entrez Id: 10631
Gene Symbol: POSTN
POSTN
0.100 AlteredExpression disease BEFREE Alveolar nitric oxide is related to periostin levels in idiopathic pulmonary fibrosis. 31755669 2019
Entrez Id: 2185
Gene Symbol: PTK2B
PTK2B
0.010 Biomarker disease BEFREE A new class of pyrimidine derivatives were identified as potent protein tyrosine kinase (PTK) inhibitors for the treatment of idiopathic pulmonary fibrosis (IPF). 31755225 2020
Entrez Id: 1514
Gene Symbol: CTSL
CTSL
0.010 Biomarker disease BEFREE A novel cathepsin L inhibitor prevents the progression of idiopathic pulmonary fibrosis. 31744600 2020
Entrez Id: 3309
Gene Symbol: HSPA5
HSPA5
0.020 Biomarker disease BEFREE GRP78 is reduced in AT2 cells from aged mice and IPF patients, and ER stress inhibitor tauroursodeoxycholic acid ameliorates ER stress and fibrosis in Grp78 KO mouse and IPF lung slice cultures. 31738079 2020
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 Biomarker disease BEFREE We collected explanted lung tissue at the time of lung transplantation from 130 PF-ILD patients (99 (76%) IPF, 14 (11%) SSc-ILD, 17 (13%) other PF-ILD), and wedge biopsies from 200 donor lungs and measured PDGF, FGF, VEGF and M-CSF concentrations by Luminex. 31732480 2019
Entrez Id: 1435
Gene Symbol: CSF1
CSF1
0.010 Biomarker disease BEFREE We collected explanted lung tissue at the time of lung transplantation from 130 PF-ILD patients (99 (76%) IPF, 14 (11%) SSc-ILD, 17 (13%) other PF-ILD), and wedge biopsies from 200 donor lungs and measured PDGF, FGF, VEGF and M-CSF concentrations by Luminex. 31732480 2019
Entrez Id: 64798
Gene Symbol: DEPTOR
DEPTOR
0.010 AlteredExpression disease BEFREE The observation that decreased DEPTOR expression associates with increased susceptibility to IPF, supports recent studies demonstrating the importance of mTOR signalling in lung fibrosis. 31710517 2020
Entrez Id: 8379
Gene Symbol: MAD1L1
MAD1L1
0.010 GeneticVariation disease BEFREE We identified and replicated three new genome-wide significant (P<5×10-8) signals of association with IPF susceptibility (associated with altered gene expression of KIF15, MAD1L1 and DEPTOR) and confirmed associations at 11 previously reported loci. 31710517 2020
Entrez Id: 56992
Gene Symbol: KIF15
KIF15
0.010 GeneticVariation disease BEFREE We identified and replicated three new genome-wide significant (P<5×10-8) signals of association with IPF susceptibility (associated with altered gene expression of KIF15, MAD1L1 and DEPTOR) and confirmed associations at 11 previously reported loci. 31710517 2020
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 Biomarker disease BEFREE Nintedanib, a multitargeted TKI, blocks fibroblast growth factor and platelet-derived growth factor receptor as well as VEGF receptor, and is indicated for the treatment of idiopathic pulmonary fibrosis. 31699213 2020
Entrez Id: 400550
Gene Symbol: FENDRR
FENDRR
0.010 AlteredExpression disease BEFREE FENDRR expression in lung tissues from patients with IPF and mice with bleomycin-induced pulmonary fibrosis was determined by quantitative real-time polymerase chain reaction. 31697569 2019
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.030 Biomarker disease BEFREE Recently, CXCL13, a ligand of CXCR5, has been reported to increase in the peripheral blood and lungs of patients with idiopathic pulmonary fibrosis (IPF). 31694639 2019
Entrez Id: 643
Gene Symbol: CXCR5
CXCR5
0.010 Biomarker disease BEFREE Recently, CXCL13, a ligand of CXCR5, has been reported to increase in the peripheral blood and lungs of patients with idiopathic pulmonary fibrosis (IPF). 31694639 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.050 Biomarker disease BEFREE Quantification of ALOX5+cells in lung explants obtained from idiopathic pulmonary fibrosis (IPF) patients indicated that half of these cells were also senescent (p16Ink4a+). 31687975 2019
Entrez Id: 83666
Gene Symbol: PARP9
PARP9
0.100 Biomarker disease BEFREE Its BAL concentrations were higher in IPF patients than in controls and correlated with disease severity. 31678459 2020